Inbred Strain Variant Database

The current version only includes exons.
(select none to include all strains)



(select none to include all consequences)



Then Download full results (no output limit) by pasting this link into your browser:


                http://ilvdb-ywcai.apps.unc.edu/download/SELECT%20distinct%20variant_id%2Cchrom%2Cpos%2Cstrain_name%2Callele_1%2Callele_2%2Cprob%2Cis_max%2Cconsequence_1%2Cconsequence_2%2Cgene_name%2Ctranscript_name%20FROM%20exon_1410b.genotype_transcript_view%20WHERE%20chrom%3D%2719%27%20and%20pos%3E%3D30000000%20and%20pos%3C%3D35000000%20and%20%28%20strain_id%20%3D%201%20OR%20strain_id%20%3D%202%20OR%20strain_id%20%3D%203%20OR%20strain_id%20%3D%204%20OR%20strain_id%20%3D%205%20OR%20strain_id%20%3D%206%20OR%20strain_id%20%3D%207%20OR%20strain_id%20%3D%208%20OR%20strain_id%20%3D%209%20%29
            

The first 1000 rows of the result:
variant_id chrom pos strain allele_1 allele_2 prob is_max consequence_1 consequence_2 gene_id transcript_id
variant_id chrom pos strain allele_1 allele_2 prob is_max consequence_1 consequence_2 gene_id transcript_id
933280 19 30003819 PWK_PhJ T T 1.0 1 5_prime_UTR_variant 5_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 CC001_Uncb38V01 G G 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 129S1_SvImJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 A_J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 CAST_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 NOD_ShiLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 NZO_HlLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 WSB_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933280 19 30003819 C57BL6J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 PWK_PhJ T T 1.0 1 missense_variant missense_variant ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 CC001_Uncb38V01 G G 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 129S1_SvImJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 A_J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 CAST_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 NOD_ShiLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 NZO_HlLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 WSB_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933281 19 30004215 C57BL6J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 WSB_EiJ A A 1.0 1 synonymous_variant synonymous_variant ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 CC001_Uncb38V01 G G 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 129S1_SvImJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 A_J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 CAST_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 NOD_ShiLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 NZO_HlLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 PWK_PhJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933283 19 30004308 C57BL6J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 PWK_PhJ A A 1.0 1 synonymous_variant synonymous_variant ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 CC001_Uncb38V01 G G 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 129S1_SvImJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 A_J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 CAST_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 NOD_ShiLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 NZO_HlLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 WSB_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933284 19 30004380 C57BL6J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 WSB_EiJ A A 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 CC001_Uncb38V01 T T 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 129S1_SvImJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 A_J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 CAST_EiJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 NOD_ShiLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 NZO_HlLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 PWK_PhJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933287 19 30004558 C57BL6J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 CAST_EiJ T T 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 PWK_PhJ T T 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 CC001_Uncb38V01 C C 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 129S1_SvImJ C C 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 A_J C C 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 NOD_ShiLtJ C C 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 NZO_HlLtJ C C 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 WSB_EiJ C C 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933289 19 30004649 C57BL6J C C 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 PWK_PhJ C C 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 CC001_Uncb38V01 T T 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 129S1_SvImJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 A_J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 CAST_EiJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 NOD_ShiLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 NZO_HlLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 WSB_EiJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933290 19 30004652 C57BL6J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 CAST_EiJ G G 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 PWK_PhJ G G 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 CC001_Uncb38V01 A A 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 129S1_SvImJ A A 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 A_J A A 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 NOD_ShiLtJ A A 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 NZO_HlLtJ A A 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 WSB_EiJ A A 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933291 19 30004662 C57BL6J A A 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 CAST_EiJ A A 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 PWK_PhJ A A 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 CC001_Uncb38V01 G G 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 129S1_SvImJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 A_J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 NOD_ShiLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 NZO_HlLtJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 WSB_EiJ G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933293 19 30004772 C57BL6J G G 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 CAST_EiJ C C 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 PWK_PhJ C C 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 CC001_Uncb38V01 T T 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 129S1_SvImJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 A_J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 NOD_ShiLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 NZO_HlLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 WSB_EiJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933294 19 30004808 C57BL6J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 CAST_EiJ C C 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 PWK_PhJ C C 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 CC001_Uncb38V01 T T 0.999909 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 129S1_SvImJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 A_J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 NOD_ShiLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 NZO_HlLtJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 WSB_EiJ T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933298 19 30004954 C57BL6J T T 1.0 1 reference reference ENSMUSG00000024815 ENSMUST00000025727
933299 19 30004978 CAST_EiJ C C 1.0 1 3_prime_UTR_variant 3_prime_UTR_variant ENSMUSG00000024815 ENSMUST00000025727